Strawberry Smoothies and Pea Soup
Smoothie DNA: Isolation of DNA from
Strawberries
modified for CHEM 2090 by Koni Stone
Materials:
-
strawberries
-
beaker
-
spoon (for measurement)
-
shampoo that contains EDTA (EDTA chelated metals
that are needed for the enzymes that degrade DNA, to keep these enzymes
inactive,
we sequester the Mg+2 ions with EDTA.)
-
salt
-
chopstick or glass rod
-
cheesecloth
-
lab grade ethanol (on ice). This will also work with ice cold rubbing alcohol.
-
cooler w/ ice
Directions:
Mash the strawberries in the
beaker.
- Add an equal amount of water, several squirts
of shampoo and a spoonful of salt.
- Stir gently.
- Strain the mixture through a wet paper towel
or cheesecloth, you will get a clear fluid.
- Pour an equal amount of ice-cold alcohol into
the fluid, you will see a cloud form.
- Take a chopstick and twirl it inside the cloud
to observe long, gooey strings of nucleic acid (DNA.)
Pea Soup: Isolation of DNA from Split
Peas
Materials:
-
50mL split peas
-
large pinch of salt (~1 mL)
-
100 ml very cold water
-
spoon (for measurement)
-
15 mL shampoo that contains EDTA (EDTA chelated metals that are needed
for the enzymes that degrade DNA, to keep these enzymes inactive, we
sequester the Mg+2 ions with EDTA.)
-
Pinch of enzymes (meat tenderizer, fresh pineapple, contact lense
cleaners)
-
chopstick or glass rod
-
cheesecloth or coffee filters or wet paper towels or a strainer (to
remove the solids)
-
lab grade ethanol (put on ice). This will also work with ice cold rubbing alcohol.
-
cooler w/ ice
Directions:
Blend peas, salt, cold water in a
blender on high for 15 seconds.
- Strain the pea soup. Add 15 mL of shampoo to
the liquid and stir gently.
- Pour aliquots into test tubes or small
beakers.
- Add a pinch of enzymes to each test tube, let
sit for a couple of minutes.
- Pour an equal amount of ice-cold rubbing
alcohol down the side of the tube. You will see a cloud form.
- Take a chopstick or stirring rod and twirl it
inside the cloud to observe long, gooey strings of nucleic acid (DNA.)
Background:
The woman behind the scenes
Rosalind Franklin made crucial contribution to
the discovery of DNA although her name did not appear in the Nobel
Prize awarded
for this achievement. Her X-ray diffraction pictures of DNA were
used by James Watson, Francis Crick and Maurice Wilkins as they
correctly
predicted the structure of DNA. Rosalind was was working
on the possible structure of DNA and even suggested the double helix
structure but she did not publish her hunches, she was a very
meticulous scientist and was
doing very thorough analyses of her x-ray crystallography data.
Even
though they were working in the same lab, at King's College in the
University of
London, personality differences precluded
Franklin and Wilkins from being collaborators. Thus, Wilkins
showed her
data to Watson and Crick (without her consent or knowledge) and this
allowed
them to complete the puzzle utilizing 3-D molecular models.
The
Nobel Prize that went to Watson, Crick and Wilkins for the discovery of
how DNA encodes information that is passed from one generation to the next.
This prize was awarded in 1962, four years after Franklin
died from ovarian cancer. The Nobel prize is not awarded posthumously, and
it is awarded to no more than three scientists. Thus, there is some
controversy over whether she would have shared the prize if she had lived long
enough.
Reference:
McGrayne, Sharon Bertsch, Nobel Prize Women in Science,
Carol Publishing Group, New York, 1993 pp 304-332.
Using sentences in well organized paragraphs, answer these questions in
your conclusion.
- What does DNA stand for?
- What are the four bases that make up DNA?
- Which bases pair up?
- What is the shape of DNA?
- Why are peas good for viewing DNA?
- What does the shampoo contribute to seeing the DNA?
- What does the salt contribute to seeing the DNA?
- What does the alcohol contribute to the experiment?
- Is there any difference between the pea soup DNA and the Strawberry
DNA? Explain your observations.
Links that were used to develop these exercises:
last edited on May 24, 2006